EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
THE ESRG-TRRD: DATABASE OF GENES WITH SPECIFIC TRANSCRIPTION REGULATION IN ERYTHROID CELLS.
PODKOLODNAYA O.A., STEPANENKO I.L.
SAMPLES AND ALIGNED: DATABASES FOR FUNCTIONAL SITE SEQUENCES.
VOROBIEV D.G., PONOMARENKO J.V., PODKOLODNAYA O.A.
B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
SEARCH FOR DEGENERATE OLIGONUCLEOTIDE MOTIFS IN TRANSCRIPTION FACTOR BINDING SITES AND EUKARYOTIC PROMOTERS (THE SYSTEM ARGO).
VISHNEVSKY O.V., PODKOLODNAYA O.A., BABENKO V.N.
RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.